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The turnout data is from data is from wikipedia. Non-presidential election years are averages for the previous and following election. Polarization data comes from the difference between House party medians in the first two DW-NOMINATE dimensions. Basically, polarization measures how much Representatives' votes broke along party lines.
Here's the puzzle: up until around 1900, the two lines track quite closely. The raw values are about the same, and they tend to move up and down together. But after 1920, the polarization and participation stop tracking each other. Why?